Changes
On September 12, 2024 at 12:12:26 PM UTC,
-
Added resource Patient Clean Large to Synthetic Breast Cancer Data
| f | 1 | { | f | 1 | { |
| 2 | "access_rights": "", | 2 | "access_rights": "", | ||
| 3 | "accrualPeriodicity": "", | 3 | "accrualPeriodicity": "", | ||
| 4 | "author": "Philipp D. Rohde", | 4 | "author": "Philipp D. Rohde", | ||
| 5 | "author_email": "", | 5 | "author_email": "", | ||
| 6 | "citation": [], | 6 | "citation": [], | ||
| 7 | "conformsTo": "", | 7 | "conformsTo": "", | ||
| 8 | "creator_user_id": "b6005781-6560-475f-aeea-d834a83f0d8f", | 8 | "creator_user_id": "b6005781-6560-475f-aeea-d834a83f0d8f", | ||
| 9 | "defined_in": "https://doi.org/10.1016/j.inffus.2024.102557", | 9 | "defined_in": "https://doi.org/10.1016/j.inffus.2024.102557", | ||
| 10 | "doi": "10.57702/4qixxfy9", | 10 | "doi": "10.57702/4qixxfy9", | ||
| 11 | "doi_date_published": null, | 11 | "doi_date_published": null, | ||
| 12 | "doi_publisher": "TIB", | 12 | "doi_publisher": "TIB", | ||
| 13 | "doi_status": false, | 13 | "doi_status": false, | ||
| 14 | "domain": "https://ldm.kisski.de", | 14 | "domain": "https://ldm.kisski.de", | ||
| 15 | "end_date": "", | 15 | "end_date": "", | ||
| 16 | "extra_authors": [ | 16 | "extra_authors": [ | ||
| 17 | { | 17 | { | ||
| 18 | "extra_author": "Antonio Jesus Diaz-Honrubia", | 18 | "extra_author": "Antonio Jesus Diaz-Honrubia", | ||
| 19 | "orcid": "0000-0001-5464-0714" | 19 | "orcid": "0000-0001-5464-0714" | ||
| 20 | }, | 20 | }, | ||
| 21 | { | 21 | { | ||
| 22 | "extra_author": "Emetis Niazmand", | 22 | "extra_author": "Emetis Niazmand", | ||
| 23 | "orcid": "0000-0001-8194-8079" | 23 | "orcid": "0000-0001-8194-8079" | ||
| 24 | }, | 24 | }, | ||
| 25 | { | 25 | { | ||
| 26 | "extra_author": "Maria-Esther Vidal", | 26 | "extra_author": "Maria-Esther Vidal", | ||
| 27 | "orcid": "0000-0003-1160-8727" | 27 | "orcid": "0000-0003-1160-8727" | ||
| 28 | } | 28 | } | ||
| 29 | ], | 29 | ], | ||
| 30 | "groups": [], | 30 | "groups": [], | ||
| 31 | "id": "de81a941-26ad-405c-b3c9-dba7f736c88a", | 31 | "id": "de81a941-26ad-405c-b3c9-dba7f736c88a", | ||
| 32 | "isopen": true, | 32 | "isopen": true, | ||
| 33 | "landing_page": "", | 33 | "landing_page": "", | ||
| 34 | "language": "", | 34 | "language": "", | ||
| 35 | "license_id": "cc-by-sa", | 35 | "license_id": "cc-by-sa", | ||
| 36 | "license_title": "Creative Commons Attribution Share-Alike", | 36 | "license_title": "Creative Commons Attribution Share-Alike", | ||
| 37 | "license_url": "http://www.opendefinition.org/licenses/cc-by-sa", | 37 | "license_url": "http://www.opendefinition.org/licenses/cc-by-sa", | ||
| 38 | "link_orkg": "https://www.orkg.org/orkg/paper/R705607", | 38 | "link_orkg": "https://www.orkg.org/orkg/paper/R705607", | ||
| 39 | "maintainer": "", | 39 | "maintainer": "", | ||
| 40 | "maintainer_email": "", | 40 | "maintainer_email": "", | ||
| 41 | "metadata_created": "2024-09-12T10:50:03.237738", | 41 | "metadata_created": "2024-09-12T10:50:03.237738", | ||
| n | 42 | "metadata_modified": "2024-09-12T12:11:57.640150", | n | 42 | "metadata_modified": "2024-09-12T12:12:26.297396", |
| 43 | "name": "synthetic-breast-cancer-data", | 43 | "name": "synthetic-breast-cancer-data", | ||
| 44 | "notes": "The data is generated using the [Synthetic Data | 44 | "notes": "The data is generated using the [Synthetic Data | ||
| 45 | Generator](https://github.com/SDM-TIB/Synthetic-Data-Generator) which | 45 | Generator](https://github.com/SDM-TIB/Synthetic-Data-Generator) which | ||
| 46 | generates process-based breast cancer treatment data following the | 46 | generates process-based breast cancer treatment data following the | ||
| 47 | distribution in a real population of breast cancer patients. The | 47 | distribution in a real population of breast cancer patients. The | ||
| 48 | collection comprises a total of 18 data sets, nine for relational | 48 | collection comprises a total of 18 data sets, nine for relational | ||
| 49 | databases and nine for RDF-based knowledge graphs. For each data | 49 | databases and nine for RDF-based knowledge graphs. For each data | ||
| 50 | format, there are three different sizes of data sets:\r\n\r\n+ _Small_ | 50 | format, there are three different sizes of data sets:\r\n\r\n+ _Small_ | ||
| 51 | models 1,000 patients\r\n+ _Medium-sized_ models 10,000 patients\r\n+ | 51 | models 1,000 patients\r\n+ _Medium-sized_ models 10,000 patients\r\n+ | ||
| 52 | _Large_ models 100,000 patients\r\n\r\nThere are three data sets of | 52 | _Large_ models 100,000 patients\r\n\r\nThere are three data sets of | ||
| 53 | each size. They differ in the parameter used for the mutation | 53 | each size. They differ in the parameter used for the mutation | ||
| 54 | probability of the data generator. The lower this value is, the closer | 54 | probability of the data generator. The lower this value is, the closer | ||
| 55 | the data is to following the treatment guideline for breast cancer | 55 | the data is to following the treatment guideline for breast cancer | ||
| 56 | patients with an amplified HER2 gene.", | 56 | patients with an amplified HER2 gene.", | ||
| n | 57 | "num_resources": 4, | n | 57 | "num_resources": 5, |
| 58 | "num_tags": 2, | 58 | "num_tags": 2, | ||
| 59 | "orcid": "0000-0002-9835-4354", | 59 | "orcid": "0000-0002-9835-4354", | ||
| 60 | "organization": { | 60 | "organization": { | ||
| 61 | "approval_status": "approved", | 61 | "approval_status": "approved", | ||
| 62 | "created": "2017-11-23T17:30:37.757128", | 62 | "created": "2017-11-23T17:30:37.757128", | ||
| 63 | "description": "The German National Library of Science and | 63 | "description": "The German National Library of Science and | ||
| 64 | Technology, abbreviated TIB, is the national library of the Federal | 64 | Technology, abbreviated TIB, is the national library of the Federal | ||
| 65 | Republic of Germany for all fields of engineering, technology, and the | 65 | Republic of Germany for all fields of engineering, technology, and the | ||
| 66 | natural sciences.", | 66 | natural sciences.", | ||
| 67 | "id": "0c5362f5-b99e-41db-8256-3d0d7549bf4d", | 67 | "id": "0c5362f5-b99e-41db-8256-3d0d7549bf4d", | ||
| 68 | "image_url": | 68 | "image_url": | ||
| 69 | 3conf/ext/tib_tmpl_bootstrap/Resources/Public/images/TIB_Logo_en.png", | 69 | 3conf/ext/tib_tmpl_bootstrap/Resources/Public/images/TIB_Logo_en.png", | ||
| 70 | "is_organization": true, | 70 | "is_organization": true, | ||
| 71 | "name": "tib", | 71 | "name": "tib", | ||
| 72 | "state": "active", | 72 | "state": "active", | ||
| 73 | "title": "TIB", | 73 | "title": "TIB", | ||
| 74 | "type": "organization" | 74 | "type": "organization" | ||
| 75 | }, | 75 | }, | ||
| 76 | "owner_org": "0c5362f5-b99e-41db-8256-3d0d7549bf4d", | 76 | "owner_org": "0c5362f5-b99e-41db-8256-3d0d7549bf4d", | ||
| 77 | "page": "", | 77 | "page": "", | ||
| 78 | "private": false, | 78 | "private": false, | ||
| 79 | "relationships_as_object": [], | 79 | "relationships_as_object": [], | ||
| 80 | "relationships_as_subject": [], | 80 | "relationships_as_subject": [], | ||
| 81 | "resources": [ | 81 | "resources": [ | ||
| 82 | { | 82 | { | ||
| 83 | "auto_update": "No", | 83 | "auto_update": "No", | ||
| 84 | "auto_update_last_update": "", | 84 | "auto_update_last_update": "", | ||
| 85 | "auto_update_url": "", | 85 | "auto_update_url": "", | ||
| 86 | "cache_last_updated": null, | 86 | "cache_last_updated": null, | ||
| 87 | "cache_url": null, | 87 | "cache_url": null, | ||
| 88 | "created": "2024-09-12T10:52:26.024392", | 88 | "created": "2024-09-12T10:52:26.024392", | ||
| 89 | "description": "Small dataset of patients respecting the | 89 | "description": "Small dataset of patients respecting the | ||
| 90 | treatment guideline.", | 90 | treatment guideline.", | ||
| 91 | "format": "CSV", | 91 | "format": "CSV", | ||
| 92 | "hash": "", | 92 | "hash": "", | ||
| 93 | "id": "583a400f-70aa-4425-8816-486d204bafde", | 93 | "id": "583a400f-70aa-4425-8816-486d204bafde", | ||
| 94 | "language": "", | 94 | "language": "", | ||
| 95 | "last_modified": "2024-09-12T10:52:26.002706", | 95 | "last_modified": "2024-09-12T10:52:26.002706", | ||
| 96 | "media": "", | 96 | "media": "", | ||
| 97 | "metadata_modified": "2024-09-12T10:52:26.017143", | 97 | "metadata_modified": "2024-09-12T10:52:26.017143", | ||
| 98 | "mimetype": "text/csv", | 98 | "mimetype": "text/csv", | ||
| 99 | "mimetype_inner": null, | 99 | "mimetype_inner": null, | ||
| 100 | "name": "Patient Clean Small", | 100 | "name": "Patient Clean Small", | ||
| 101 | "package_id": "de81a941-26ad-405c-b3c9-dba7f736c88a", | 101 | "package_id": "de81a941-26ad-405c-b3c9-dba7f736c88a", | ||
| 102 | "position": 0, | 102 | "position": 0, | ||
| 103 | "resource_type": null, | 103 | "resource_type": null, | ||
| 104 | "rights": "", | 104 | "rights": "", | ||
| 105 | "size": 135346, | 105 | "size": 135346, | ||
| 106 | "state": "active", | 106 | "state": "active", | ||
| 107 | "url": | 107 | "url": | ||
| 108 | 83a400f-70aa-4425-8816-486d204bafde/download/patient_clean_small.csv", | 108 | 83a400f-70aa-4425-8816-486d204bafde/download/patient_clean_small.csv", | ||
| 109 | "url_type": "upload" | 109 | "url_type": "upload" | ||
| 110 | }, | 110 | }, | ||
| 111 | { | 111 | { | ||
| 112 | "auto_update": "No", | 112 | "auto_update": "No", | ||
| 113 | "auto_update_last_update": "", | 113 | "auto_update_last_update": "", | ||
| 114 | "auto_update_url": "", | 114 | "auto_update_url": "", | ||
| 115 | "cache_last_updated": null, | 115 | "cache_last_updated": null, | ||
| 116 | "cache_url": null, | 116 | "cache_url": null, | ||
| 117 | "created": "2024-09-12T11:01:18.679012", | 117 | "created": "2024-09-12T11:01:18.679012", | ||
| 118 | "description": "Small dataset of patients mainly respecting the | 118 | "description": "Small dataset of patients mainly respecting the | ||
| 119 | treatment guideline.", | 119 | treatment guideline.", | ||
| 120 | "format": "CSV", | 120 | "format": "CSV", | ||
| 121 | "hash": "", | 121 | "hash": "", | ||
| 122 | "id": "0fc5479a-d237-4589-a948-612291a627e0", | 122 | "id": "0fc5479a-d237-4589-a948-612291a627e0", | ||
| 123 | "language": "", | 123 | "language": "", | ||
| 124 | "last_modified": "2024-09-12T11:01:18.651938", | 124 | "last_modified": "2024-09-12T11:01:18.651938", | ||
| 125 | "media": "", | 125 | "media": "", | ||
| 126 | "metadata_modified": "2024-09-12T11:01:18.668990", | 126 | "metadata_modified": "2024-09-12T11:01:18.668990", | ||
| 127 | "mimetype": "text/csv", | 127 | "mimetype": "text/csv", | ||
| 128 | "mimetype_inner": null, | 128 | "mimetype_inner": null, | ||
| 129 | "name": "Patient Mid Small", | 129 | "name": "Patient Mid Small", | ||
| 130 | "package_id": "de81a941-26ad-405c-b3c9-dba7f736c88a", | 130 | "package_id": "de81a941-26ad-405c-b3c9-dba7f736c88a", | ||
| 131 | "position": 1, | 131 | "position": 1, | ||
| 132 | "resource_type": null, | 132 | "resource_type": null, | ||
| 133 | "rights": "", | 133 | "rights": "", | ||
| 134 | "size": 135606, | 134 | "size": 135606, | ||
| 135 | "state": "active", | 135 | "state": "active", | ||
| 136 | "url": | 136 | "url": | ||
| 137 | /0fc5479a-d237-4589-a948-612291a627e0/download/patient_mid_small.csv", | 137 | /0fc5479a-d237-4589-a948-612291a627e0/download/patient_mid_small.csv", | ||
| 138 | "url_type": "upload" | 138 | "url_type": "upload" | ||
| 139 | }, | 139 | }, | ||
| 140 | { | 140 | { | ||
| 141 | "auto_update": "No", | 141 | "auto_update": "No", | ||
| 142 | "auto_update_last_update": "", | 142 | "auto_update_last_update": "", | ||
| 143 | "auto_update_url": "", | 143 | "auto_update_url": "", | ||
| 144 | "cache_last_updated": null, | 144 | "cache_last_updated": null, | ||
| 145 | "cache_url": null, | 145 | "cache_url": null, | ||
| 146 | "created": "2024-09-12T11:01:46.284259", | 146 | "created": "2024-09-12T11:01:46.284259", | ||
| 147 | "description": "Small dataset of patients mainly not respecting | 147 | "description": "Small dataset of patients mainly not respecting | ||
| 148 | the treatment guideline.", | 148 | the treatment guideline.", | ||
| 149 | "format": "CSV", | 149 | "format": "CSV", | ||
| 150 | "hash": "", | 150 | "hash": "", | ||
| 151 | "id": "8940e96b-f192-47b3-b24d-7eb7619ce92a", | 151 | "id": "8940e96b-f192-47b3-b24d-7eb7619ce92a", | ||
| 152 | "language": "", | 152 | "language": "", | ||
| 153 | "last_modified": "2024-09-12T11:01:46.254384", | 153 | "last_modified": "2024-09-12T11:01:46.254384", | ||
| 154 | "media": "", | 154 | "media": "", | ||
| 155 | "metadata_modified": "2024-09-12T11:01:46.275565", | 155 | "metadata_modified": "2024-09-12T11:01:46.275565", | ||
| 156 | "mimetype": "text/csv", | 156 | "mimetype": "text/csv", | ||
| 157 | "mimetype_inner": null, | 157 | "mimetype_inner": null, | ||
| 158 | "name": "Patient Dirty Small", | 158 | "name": "Patient Dirty Small", | ||
| 159 | "package_id": "de81a941-26ad-405c-b3c9-dba7f736c88a", | 159 | "package_id": "de81a941-26ad-405c-b3c9-dba7f736c88a", | ||
| 160 | "position": 2, | 160 | "position": 2, | ||
| 161 | "resource_type": null, | 161 | "resource_type": null, | ||
| 162 | "rights": "", | 162 | "rights": "", | ||
| 163 | "size": 135807, | 163 | "size": 135807, | ||
| 164 | "state": "active", | 164 | "state": "active", | ||
| 165 | "url": | 165 | "url": | ||
| 166 | 940e96b-f192-47b3-b24d-7eb7619ce92a/download/patient_dirty_small.csv", | 166 | 940e96b-f192-47b3-b24d-7eb7619ce92a/download/patient_dirty_small.csv", | ||
| 167 | "url_type": "upload" | 167 | "url_type": "upload" | ||
| 168 | }, | 168 | }, | ||
| 169 | { | 169 | { | ||
| 170 | "auto_update": "No", | 170 | "auto_update": "No", | ||
| 171 | "auto_update_last_update": "", | 171 | "auto_update_last_update": "", | ||
| 172 | "auto_update_url": "", | 172 | "auto_update_url": "", | ||
| 173 | "cache_last_updated": null, | 173 | "cache_last_updated": null, | ||
| 174 | "cache_url": null, | 174 | "cache_url": null, | ||
| 175 | "created": "2024-09-12T12:11:57.650909", | 175 | "created": "2024-09-12T12:11:57.650909", | ||
| 176 | "description": "Medium-sized dataset of patients respecting the | 176 | "description": "Medium-sized dataset of patients respecting the | ||
| 177 | treatment guideline.", | 177 | treatment guideline.", | ||
| 178 | "format": "CSV", | 178 | "format": "CSV", | ||
| 179 | "hash": "", | 179 | "hash": "", | ||
| 180 | "id": "b231d85c-de6b-4e82-b999-c4eef5d935ac", | 180 | "id": "b231d85c-de6b-4e82-b999-c4eef5d935ac", | ||
| 181 | "language": "", | 181 | "language": "", | ||
| 182 | "last_modified": "2024-09-12T12:11:57.626759", | 182 | "last_modified": "2024-09-12T12:11:57.626759", | ||
| 183 | "media": "", | 183 | "media": "", | ||
| 184 | "metadata_modified": "2024-09-12T12:11:57.643802", | 184 | "metadata_modified": "2024-09-12T12:11:57.643802", | ||
| 185 | "mimetype": "text/csv", | 185 | "mimetype": "text/csv", | ||
| 186 | "mimetype_inner": null, | 186 | "mimetype_inner": null, | ||
| 187 | "name": "Patient Clean Medium", | 187 | "name": "Patient Clean Medium", | ||
| 188 | "package_id": "de81a941-26ad-405c-b3c9-dba7f736c88a", | 188 | "package_id": "de81a941-26ad-405c-b3c9-dba7f736c88a", | ||
| 189 | "position": 3, | 189 | "position": 3, | ||
| 190 | "resource_type": null, | 190 | "resource_type": null, | ||
| 191 | "rights": "", | 191 | "rights": "", | ||
| 192 | "size": 1352578, | 192 | "size": 1352578, | ||
| 193 | "state": "active", | 193 | "state": "active", | ||
| 194 | "url": | 194 | "url": | ||
| 195 | 31d85c-de6b-4e82-b999-c4eef5d935ac/download/patient_clean_medium.csv", | 195 | 31d85c-de6b-4e82-b999-c4eef5d935ac/download/patient_clean_medium.csv", | ||
| 196 | "url_type": "upload" | 196 | "url_type": "upload" | ||
| t | t | 197 | }, | ||
| 198 | { | ||||
| 199 | "auto_update": "No", | ||||
| 200 | "auto_update_last_update": "", | ||||
| 201 | "auto_update_url": "", | ||||
| 202 | "cache_last_updated": null, | ||||
| 203 | "cache_url": null, | ||||
| 204 | "created": "2024-09-12T12:12:26.320675", | ||||
| 205 | "description": "Large dataset of patients respecting the | ||||
| 206 | treatment guideline.", | ||||
| 207 | "format": "CSV", | ||||
| 208 | "hash": "", | ||||
| 209 | "id": "3fb59973-5cb3-40f8-b735-bf74b6ce19bd", | ||||
| 210 | "language": "", | ||||
| 211 | "last_modified": "2024-09-12T12:12:26.278248", | ||||
| 212 | "media": "", | ||||
| 213 | "metadata_modified": "2024-09-12T12:12:26.302918", | ||||
| 214 | "mimetype": "text/csv", | ||||
| 215 | "mimetype_inner": null, | ||||
| 216 | "name": "Patient Clean Large", | ||||
| 217 | "package_id": "de81a941-26ad-405c-b3c9-dba7f736c88a", | ||||
| 218 | "position": 4, | ||||
| 219 | "resource_type": null, | ||||
| 220 | "rights": "", | ||||
| 221 | "size": 13523089, | ||||
| 222 | "state": "active", | ||||
| 223 | "url": | ||||
| 224 | fb59973-5cb3-40f8-b735-bf74b6ce19bd/download/patient_clean_large.csv", | ||||
| 225 | "url_type": "upload" | ||||
| 197 | } | 226 | } | ||
| 198 | ], | 227 | ], | ||
| 199 | "services_used_list": "", | 228 | "services_used_list": "", | ||
| 200 | "spatial": "", | 229 | "spatial": "", | ||
| 201 | "spatial_resolution": "", | 230 | "spatial_resolution": "", | ||
| 202 | "start_date": "", | 231 | "start_date": "", | ||
| 203 | "state": "draft", | 232 | "state": "draft", | ||
| 204 | "tags": [ | 233 | "tags": [ | ||
| 205 | { | 234 | { | ||
| 206 | "display_name": "breast cancer", | 235 | "display_name": "breast cancer", | ||
| 207 | "id": "84c0bfaf-6c8a-4d02-b950-b2eaa4486f54", | 236 | "id": "84c0bfaf-6c8a-4d02-b950-b2eaa4486f54", | ||
| 208 | "name": "breast cancer", | 237 | "name": "breast cancer", | ||
| 209 | "state": "active", | 238 | "state": "active", | ||
| 210 | "vocabulary_id": null | 239 | "vocabulary_id": null | ||
| 211 | }, | 240 | }, | ||
| 212 | { | 241 | { | ||
| 213 | "display_name": "cancer", | 242 | "display_name": "cancer", | ||
| 214 | "id": "11f1523b-6815-4b7a-921e-9ee6087631ac", | 243 | "id": "11f1523b-6815-4b7a-921e-9ee6087631ac", | ||
| 215 | "name": "cancer", | 244 | "name": "cancer", | ||
| 216 | "state": "active", | 245 | "state": "active", | ||
| 217 | "vocabulary_id": null | 246 | "vocabulary_id": null | ||
| 218 | } | 247 | } | ||
| 219 | ], | 248 | ], | ||
| 220 | "temporal_resolution": "", | 249 | "temporal_resolution": "", | ||
| 221 | "title": "Synthetic Breast Cancer Data", | 250 | "title": "Synthetic Breast Cancer Data", | ||
| 222 | "type": "dataset", | 251 | "type": "dataset", | ||
| 223 | "url": "https://github.com/SDM-TIB/Synthetic-Data-Generator", | 252 | "url": "https://github.com/SDM-TIB/Synthetic-Data-Generator", | ||
| 224 | "version": "", | 253 | "version": "", | ||
| 225 | "version_note": "" | 254 | "version_note": "" | ||
| 226 | } | 255 | } |